BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B02LP1|AL426150
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1479 1146 0.0
3x_Contig19 530 e-150
>3x_Contig1479
Length = 7316
Score = 1146 bits (575), Expect = 0.0
Identities = 587/593 (98%)
Strand = Plus / Plus
Query: 213 tctgctaaagttttattgacaggtgcgtyaggtttcatagcgttgcatgttttagatcag 272
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tctgctaaagttttattgacaggtgcgtcaggtttcatagcgttgcatgttttagatcag 60
Query: 273 ctgctagctgctggttatgaagtcgttggtacagttcgttctgaagaaaaagctgagcca 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgctagctgctggttatgaagtcgttggtacagttcgttctgaagaaaaagctgagcca 120
Query: 333 attaagaaggaattggctaaggracacccaaatggtaagttccaattcgaagtcgttgtt 392
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 121 attaagaaggaattggctaaggaacacccaaatggtaagtaccaattcgaagtcgttgtt 180
Query: 393 gatatcgcagctccaaacgctttcgatgctgttttccaaaagcacactgacttgaaatac 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatatcgcagctccaaacgctttcgatgctgttttccaaaagcacactgacttgaaatac 240
Query: 453 gtcctgcacactgcttctccattctcgtttggtttgacaaagagcaacgaagaaaactac 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcctgcacactgcttctccattctcgtttggtttgacaaagagcaacgaagaaaactac 300
Query: 513 ttgattccggccactcacggtaccaagtctgtycttgagtctattcaaaaatacggtaag 572
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 ttgattccggccactcacggtaccaagtctgtccttgagtctattcaaaaatacggtaag 360
Query: 573 aacgtcgaacatgttattgttacatcttcctatgcagctatcatgcgcttagatcatgcc 632
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacgtcgaacatgtaattgttacatcttcctatgcagctatcatgcgcttagatcatgcc 420
Query: 633 ggtgacccaaatttcattcatgatgatacttcttggaatcctatcacctgggaagaagct 692
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 ggtgacccaaatttcattcatgatgaaacttcttggaatcctatcacctgggaagaagct 480
Query: 693 cgtgaaaactccgttactgcatacattgcttctaagaaatatgccgaaaagttggcctgg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgtgaaaactccgttactgcatacattgcttctaagaaatatgccgaaaagttggcctgg 540
Query: 753 gattttgtaaaggacaacaattctacattcaatttgactacagtgaaccctcc 805
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gattttgtaaaggacaacaattctacattcaatttgactacagtgaaccctcc 593
Score = 1132 bits (568), Expect = 0.0
Identities = 596/610 (97%)
Strand = Plus / Plus
Query: 1 gatctttattcttaggaagaagtcagttatagtctttgaggaacatttgaatttggatat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1848 gatctttattcttaggaagaagtcagtgatagtctttgaggaacatttgaatttggatat 1907
Query: 61 aaaadawwagggttccagagagaactttcctttcttacagtttagctcctaattggtctc 120
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 aaaaaaaaagggttccagagagaactttcctttcttacagtttagctcctaattggtctc 1967
Query: 121 tatatgggatattaagtttacggtaatactaagagctaggtatctatcccagtgactact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 tatatgggatattaagtttacggtaatactaagagctaggtatctatcccagtgactact 2027
Query: 181 caattgataacataattgaaataagaragatgtctgctaaagttttattgacaggtgcgt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2028 caattgataacataattgaaataagaaagatgtctgctaaagttttattgacaggtgcgt 2087
Query: 241 yaggtttcatagcgttgcatgttttagatcagctgctagctgctggttatgaagtcgttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 caggtttcatagcgttgcatgttttagatcagctgctagctgctggttatgaagtcgttg 2147
Query: 301 gtacagttcgttctgaagaaaaagctgagccaattaagaaggaattggctaaggracacc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2148 gtacagttcgttctgaagaaaaagctgagccaattaagaaggaattggctaaggaacacc 2207
Query: 361 caaatggtaagttccaattcgaagtcgttgttgatatcgcagctccaaacgctttcgatg 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2208 caaatggtaagtaccaattcgaagtcgttgttgatatcgcagctccaaacgctttcgatg 2267
Query: 421 ctgttttccaaaagcacactgacttgaaatacgtcctgcacactgcttctccattctcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2268 ctgttttccaaaagcacactgacttgaaatacgtcctgcacactgcttctccattctcgt 2327
Query: 481 ttggtttgacaaagagcaacgaagaaaactacttgattccggccactcacggtaccaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2328 ttggtttgacaaagagcaacgaagaaaactacttgattccggccactcacggtaccaagt 2387
Query: 541 ctgtycttgagtctattcaaaaatacggtaagaacgtcgaacatgttattgttacatctt 600
|||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 2388 ctgtccttgagtctattcaaaaatacggtaagaacgtcgaacatgtagtagttacttctt 2447
Query: 601 cctatgcagc 610
||| ||||||
Sbjct: 2448 cctttgcagc 2457
Score = 185 bits (93), Expect = 9e-47
Identities = 153/173 (88%)
Strand = Plus / Plus
Query: 633 ggtgacccaaatttcattcatgatgatacttcttggaatcctatcacctgggaagaagct 692
|||||||||| |||||| ||||||| ||| ||||||| || ||| |||||||| |||
Sbjct: 2480 ggtgacccaactttcatcaatgatgaaactacttggaacccggtcatttgggaagacgct 2539
Query: 693 cgtgaaaactccgttactgcatacattgcttctaagaaatatgccgaaaagttggcctgg 752
|||||| | ||| |||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 2540 cgtgaagatgccgctacttcatatgttgcttctaagaaatatgccgaaaagttggcctgg 2599
Query: 753 gattttgtaaaggacaacaattctacattcaatttgactacagtgaaccctcc 805
||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 gatttcgtgaaggacaacaattctacattcaatttgactacagtgaaccctcc 2652
>3x_Contig19
Length = 772
Score = 530 bits (266), Expect = e-150
Identities = 296/308 (96%)
Strand = Plus / Minus
Query: 199 aaataagaragatgtctgctaaagttttattgacaggtgcgtyaggtttcatagcgttgc 258
|||||| | | |||||||| || ||||||||||||||||| | |||||| || ||| |||
Sbjct: 320 aaataaaaaaaatgtctgcaaaggttttattgacaggtgcttcaggttttattgcgctgc 261
Query: 259 atgttttagatcagctgctagctgctggttatgaagtcgttggtacagttcgttctgaag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgttttagatcagctgctagctgctggttatgaagtcgttggtacagttcgttctgaag 201
Query: 319 aaaaagctgagccaattaagaaggaattggctaaggracacccaaatggtaagttccaat 378
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 200 aaaaagctgagccaattaagaaggaattggctaaggaacacccaaatggtaagtaccaat 141
Query: 379 tcgaagtcgttgttgatatcgcagctccaaacgctttcgatgctgttttccaaaagcaca 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcgaagtcgttgttgatatcgcagctccaaacgctttcgatgctgttttccaaaagcaca 81
Query: 439 ctgacttgaaatacgtcctgcacactgcttctccattctcgtttggtttgacaaagagca 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ctgacttgaaatacgtcctgcacactgcttctccattctcgtttggtttgacaaagagca 21
Query: 499 acgaagaa 506
||||||||
Sbjct: 20 acgaagaa 13
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5545
Number of Sequences: 1807
Number of extensions: 5545
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)